PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016649012.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family TCP
Protein Properties Length: 184aa    MW: 20801.2 Da    PI: 6.5998
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016649012.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP113.14e-3559153283
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..............ssssaseceaesssssa 82 
                     + kkdrhski T++g+RdRRvRls+++a++fFdLqd LGfdk+skt+eWLl+++ +aik+l                 s +s+sec++++   s+
  XP_016649012.1  59 PMKKDRHSKIFTAQGLRDRRVRLSINVARQFFDLQDLLGFDKASKTLEWLLTKSRRAIKQLGTRnkhltcststgrskSLTSSSECDDDDVD-SD 152
                     679**********************************************************8887888777666555544444556222222.22 PP

             TCP  83 s 83 
                      
  XP_016649012.1 153 T 153
                     2 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036349.0E-3760152IPR005333Transcription factor, TCP
PROSITE profilePS5136933.60661119IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048831Biological Processregulation of shoot system development
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MAPPLPQSLT HLGVSSNTVP PSINADDHHH YHNYYGAINN DNIFPHFLHS SREDIVAPPM  60
KKDRHSKIFT AQGLRDRRVR LSINVARQFF DLQDLLGFDK ASKTLEWLLT KSRRAIKQLG  120
TRNKHLTCST STGRSKSLTS SSECDDDDVD SDTNEVENVA SKEKEIYIEP PDPLCFTVGQ  180
ELQE
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00215DAPTransfer from AT1G67260Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008230423.11e-120PREDICTED: transcription factor DICHOTOMA-like
TrEMBLM5XFN81e-105M5XFN8_PRUPE; Uncharacterized protein (Fragment)
STRINGGLYMA13G07475.15e-31(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17383294
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.21e-29TCP family protein